Stock Number: 006394 Strain Name: B6;129-Apba2tm1Sud Apba3tm1Sud Apba1tm1Sud/J

Allele: Apba2tm1Sud Protocol Name: Apba2tm1Sud Method: Standard PCR Version: 1.1 Created: 27-June -2008 Updated: 24-September-2009

Expected Results: Mutant = 442 bp Heterozygote = 360 bp and 442 bp Wild type = 360 bp

Gel Image

Image Image file View Full Size

Gel Information: Separated by gel electrophoresis on a 3.0% agarose gel.

Protocol Primers

Primer 5' Label Sequence 5' --> 3' 3' Label Primer Type oIMR6287 - GGC TCC TTA AGC ATG GTC - Forward oIMR6288 - GGC ATA CTG CCA CAT TCC CTC - Reverse

Number of Reactions

Reaction/Components  Reaction Component Volume (µl) Final Concentration Total Volume (µl) ddH2O 3.96 - 3.96 10 X PCR Buffer II (ABI) 1.20 1.00 X 1.20 25 mM MgCl2 0.96 2.00 mM 0.96 2.5 mM dNTP 0.96 0.20 mM 0.96 20 uM oIMR6287 0.60 1.00 uM 0.60 20 uM oIMR6288 0.60 1.00 uM 0.60 5 mM DNA Loading Dye 1.66 0.69 mM 1.66 5 U/ul Taq DNA Polymerase 0.06 0.03 U/ul 0.06 DNA 2.00 - 2.00

Cycling  Step # Temp °C Time Note 1 94 3 min - 2 94 30 sec - 3 53 1 min - 4 72 1.5 min repeat steps 2-4 for 35 cycles 5 72 2 min - 6 10 - hold

This genotyping protocol is used for the following strains:   Stock Number Strain Name 006394 B6;129-Apba2tm1Sud Apba3tm1Sud Apba1tm1Sud/J Genotyping resources and troubleshooting This page contains guidelines, frequently asked questions, and helpful external links to genotyping and PCR resources.